BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D09LP1|AL429569
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1475 1702 0.0
>3x_Contig1475
Length = 10676
Score = 1702 bits (858), Expect = 0.0
Identities = 876/880 (99%), Gaps = 2/880 (0%)
Strand = Plus / Plus
Query: 1 gttggtaggtaatatgtgtattattgttattactgtttgctgtgctaccgttattactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5310 gttggtaggtaatatgtgtattattgttattactgtttgctgtgctaccgttattactgc 5369
Query: 61 cactactattactgccactactagaattactgaaaggaccatgaacctgatcggtttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5370 cactactattactgccactactagaattactgaaaggaccatgaacctgatcggtttcga 5429
Query: 121 acatataggttggagaaacaattctattcatggtagatgagacctgcgggttttgatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5430 acatataggttggagaaacaattctattcatggtagatgagacctgcgggttttgatttt 5489
Query: 181 gatattttggatgtaggaaggatcctgtggagtgaggaggatttgacgctgctgaggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5490 gatattttggatgtaggaaggatcctgtggagtgaggaggatttgacgctgctgaggatg 5549
Query: 241 ggaaatgaatagtgtattcatttcctgccgtagatggagggggcgagattgattctgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5550 ggaaatgaatagtgtattcatttcctgccgtagatggagggggcgagattgattctgctg 5609
Query: 301 tcgatctcgagtttagtaatgaagtaatattgatcttttgagctgaaattgatgagatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5610 tcgatctcgagtttagtaatgaagtaatattgatcttttgagctgaaattgatgagatgc 5669
Query: 361 ctgcacccggatctattttctctgtggaacaatcaaaatgtagtctttttggagtcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5670 ctgcacccggatctattttctctgtggaacaatcaaaatgtagtctttttggagtcatgg 5729
Query: 421 cgcttcctgtggcatgcagatctctatcacgggaagcgctcgaggtctcaaggatcggcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5730 cgcttcctgtggcatgcagatctctatcacgggaagcgctcgaggtctcaaggatcggcg 5789
Query: 481 aagatgaaggcgca-caataccgctcgcaccgtcatgtgaaacagttccaggattaccaa 539
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5790 aagatgaaggcgcagcaataccgctcgcaccgtcatgtgaaacagttccaggattaccaa 5849
Query: 540 tgtttctgccattgccctttttgccttcgagtctatgtccgctttgtcgcagcatgcgtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5850 tgtttctgccattgccctttttgccttcgagtctatgtccgctttgtcgcagcatgcgtt 5909
Query: 600 cattttgatgactaccagtatcagcttgaatttcctcgccctttcttgaatcgtgaagtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5910 cattttgatgactaccagtatcagcttgaatttcctcgccctttcttgaatcgtgaagtg 5969
Query: 660 tttctgtttcactcacttgaccagagtctatcctatcgttgaacaaatacacgggagtgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5970 tttctgtttcactcacttgaccagagtctatcctatcgttgaacaaatacacgggagtgc 6029
Query: 720 gcgagtcttgatataaggtgctactccctttcccagtgttcggcagcgtattgctactgg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6030 gcgagtcttgatataaggtgctactccctttcccagtgttcggcagcgtattgctactgg 6089
Query: 780 atatacagatagatggtgtacgcgtatttatttttggaacttgttgtttatcagccgaaa 839
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6090 atatacagatagatggtgtacgcgtatttatttttggaacatgttgtttatcagccgaaa 6149
Query: 840 ccacgtgatcwaagtcttgggta-ccgtttttttctcaaa 878
|||||||||| |||||||||||| ||||||||||||||||
Sbjct: 6150 ccacgtgatcaaagtcttgggtacccgtttttttctcaaa 6189
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5884
Number of Sequences: 1807
Number of extensions: 5884
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)